Transcript: ENSDART00000151810.2 GPATCH8-203

Description

G patch domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-6966]

Location

About this transcript

This transcript has 5 exons, is associated with 174 variant alleles and maps to 19 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151193.3	GPATCH8-204	7025	1498aa	ENSDARP00000125720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IS56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185858.1	GPATCH8-205	4393	1435aa	ENSDARP00000155610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9P7I3	-
ENSDART00000151810.2	GPATCH8-203	569	46aa	ENSDARP00000126277.1	Nonsense mediated decay	-	-
ENSDART00000151745.2	GPATCH8-202	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000151369.2	GPATCH8-201	421	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 569 bps, Translation length: 46 residues

Version

ENSDART00000151810.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.