Transcript: ENSDART00000152378.2 TGIF1-202

Description

TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]

Location

About this transcript

This transcript has 3 exons, is annotated with 15 domains and features, is associated with 478 variant alleles and maps to 174 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000082434.6	TGIF1-201	2302	273aa	ENSDARP00000076869.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q803F0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152378.2	TGIF1-202	3067	264aa	ENSDARP00000127055.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000149875.2	TGIF1-203	730	192aa	ENSDARP00000124837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 3,067 bps, Translation length: 264 residues

Version

ENSDART00000152378.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]