Transcript: ENSDART00000082324.6 zpcx-201

Description

zona pellucida protein C [Source:ZFIN;Acc:ZDB-GENE-040824-1]

Gene Synonyms

wu:fi26f06, zgc:123040

Location

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 189 variant alleles and maps to 157 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000082324.6	zpcx-201	1839	552aa	ENSDARP00000076760.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155422.2	zpcx-203	907	181aa	ENSDARP00000128885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000154048.2	zpcx-202	896	104aa	ENSDARP00000129434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,839 bps, Translation length: 552 residues

Version

ENSDART00000082324.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.