Transcript: ENSDART00000180230.1 MMP28-203

Description

matrix metallopeptidase 28 [Source:ZFIN;Acc:ZDB-GENE-100226-1]

Location

About this transcript

This transcript has 8 exons, is annotated with 35 domains and features, is associated with 10 variant alleles and maps to 87 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000180230.1	MMP28-203	2228	501aa	ENSDARP00000153136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RUJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000082026.6	MMP28-202	1844	373aa	ENSDARP00000076463.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000156883.2	MMP28-201	1149	269aa	ENSDARP00000127669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,228 bps, Translation length: 501 residues

Version

ENSDART00000180230.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.