Transcript: ENSDART00000081941.5 themis2-201

Description

thymocyte selection associated family member 2 [Source:ZFIN;Acc:ZDB-GENE-110411-89]

Location

Chromosome 16: 4,725,829-4,746,492 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 461 variant alleles and maps to 124 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000058964.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081941.5	themis2-201	2070	689aa	ENSDARP00000076379.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWG7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000193513.1	themis2-203	2424	644aa	ENSDARP00000145030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000150069.2	themis2-202	237	79aa	ENSDARP00000124552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,070 bps, Translation length: 689 residues

Version

ENSDART00000081941.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000081941.5 themis2-201

Summary

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Transcript: ENSDART00000081941.5 themis2-201

Summary

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