Transcript: ENSDART00000081122.7 COLGALT1-201

Description

collagen beta(1-O)galactosyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-070424-114]

Location

About this transcript

This transcript has 12 exons, is annotated with 18 domains and features, is associated with 800 variant alleles and maps to 133 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081122.7	COLGALT1-201	3636	604aa	ENSDARP00000075565.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PMF6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,636 bps, Translation length: 604 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A5PMF6

Version

ENSDART00000081122.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.