Transcript: ENSDART00000098053.4 nitr3b-201

Description

novel immune-type receptor 3b [Source:ZFIN;Acc:ZDB-GENE-001106-16]

Gene Synonyms

nitr, nitr3, nitr3b_2, nitr3d_7, nitr3r.1, nitr3r.3, nitr3r.9, si:dz221h6.1

Location

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features, is associated with 818 variant alleles and maps to 138 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000098053.4	nitr3b-201	693	230aa	ENSDARP00000088826.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161873.2	nitr3b-202	820	133aa	ENSDARP00000136630.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000170003.2	nitr3b-203	693	230aa	ENSDARP00000134088.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q801W9	-
ENSDART00000191583.1	nitr3b-205	363	121aa	ENSDARP00000156465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000192609.1	nitr3b-206	363	121aa	ENSDARP00000144681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000182348.1	nitr3b-204	354	118aa	ENSDARP00000147068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 693 bps, Translation length: 230 residues

Version

ENSDART00000098053.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.