Transcript: ENSDART00000146405.3 LAMTOR3-202

Description

late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:ZFIN;Acc:ZDB-GENE-050522-345]

Location

Chromosome 13: 12,479,268-12,486,058 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 388 variant alleles and maps to 66 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000057075.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146195.2	LAMTOR3-201	728	138aa	ENSDARP00000116826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JJN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145152.3	LAMTOR3-204	589	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000146405.3	LAMTOR3-202	789	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000147994.2	LAMTOR3-203	578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000134132.3	LAMTOR3-205	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 789 bps,

Version

ENSDART00000146405.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000146405.3 LAMTOR3-202

Summary

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Transcript: ENSDART00000146405.3 LAMTOR3-202

Summary

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