Transcript: ENSDART00000156234.2 ttc12-201

Description

tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]

Location

About this transcript

This transcript has 21 exons, is annotated with 16 domains and features, is associated with 7 variant alleles and maps to 212 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156234.2	ttc12-201	3214	700aa	ENSDARP00000128846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WF42	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157380.2	ttc12-202	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 3,214 bps, Translation length: 700 residues

Version

ENSDART00000156234.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported only [Definitions]