Transcript: ENSDART00000132520.3 slc22a7b.1-202

Description

solute carrier family 22 member 7b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1311]

Location

About this transcript

This transcript has 11 exons, is associated with 315 variant alleles and maps to 84 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000031998.8	slc22a7b.1-201	1739	546aa	ENSDARP00000033859.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q880	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132520.3	slc22a7b.1-202	1914	232aa	ENSDARP00000113327.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 11, Coding exons: 4, Transcript length: 1,914 bps, Translation length: 232 residues

Version

ENSDART00000132520.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.