Transcript: ENSDART00000138912.3 VEGFD-201

Description

vascular endothelial growth factor D [Source:ZFIN;Acc:ZDB-GENE-070810-6]

Location

About this transcript

This transcript has 7 exons, is annotated with 16 domains and features, is associated with 678 variant alleles and maps to 148 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138912.3	VEGFD-201	1410	272aa	ENSDARP00000121602.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q208T6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000079152.5	VEGFD-203	819	272aa	ENSDARP00000073608.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q208T6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134223.2	VEGFD-202	918	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,410 bps, Translation length: 272 residues

Version

ENSDART00000138912.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.