Transcript: ENSDART00000144823.3 c1galt1la-202

Description

core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, like a [Source:ZFIN;Acc:ZDB-GENE-061013-303]

Location

Chromosome 23: 28,125,692-28,131,574 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 367 variant alleles and maps to 60 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055585.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053958.7	c1galt1la-201	1610	408aa	ENSDARP00000053957.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGX4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158260.2	c1galt1la-203	1664	408aa	ENSDARP00000134314.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGX4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144823.3	c1galt1la-202	1254	286aa	ENSDARP00000116354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000182618.1	c1galt1la-204	1229	408aa	ENSDARP00000148771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGX4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,254 bps, Translation length: 286 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000144823.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000144823.3 c1galt1la-202

Summary

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Transcript: ENSDART00000144823.3 c1galt1la-202

Summary

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