Transcript: ENSDART00000139964.2 rps27.2-203

Description

ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]

Location

About this transcript

This transcript has 4 exons, is annotated with 20 domains and features, is associated with 241 variant alleles and maps to 146 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077834.6	rps27.2-201	545	84aa	ENSDARP00000072300.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PBT1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139964.2	rps27.2-203	569	52aa	ENSDARP00000113389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000134604.2	rps27.2-202	876	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 569 bps, Translation length: 52 residues

Version

ENSDART00000139964.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.