Transcript: ENSDART00000127805.3 pom121-202

Description

POM121 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-6557]

Location

About this transcript

This transcript has 13 exons, is annotated with 44 domains and features, is associated with 45 variant alleles and maps to 333 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127805.3	pom121-202	4200	1201aa	ENSDARP00000107396.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R543	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000077426.6	pom121-201	768	136aa	ENSDARP00000071893.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 4,200 bps, Translation length: 1,201 residues

Version

ENSDART00000127805.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.