Transcript: ENSDART00000148748.2 LMO4-202

Description

LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]

Gene Synonyms

fc45c09, lmo4l, wu:fc45c09

Location

About this transcript

This transcript has 6 exons, is annotated with 23 domains and features, is associated with 262 variant alleles and maps to 58 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000076997.6	LMO4-201	1754	165aa	ENSDARP00000071465.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHC2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148748.2	LMO4-202	880	165aa	ENSDARP00000123719.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHC2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 880 bps, Translation length: 165 residues

Version

ENSDART00000148748.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.