Transcript: ENSDART00000076596.6 SPATA17-201

Description

spermatogenesis associated 17 [Source:ZFIN;Acc:ZDB-GENE-111214-1]

Location

About this transcript

This transcript has 10 exons, is annotated with 19 domains and features, is associated with 1236 variant alleles and maps to 160 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000076596.6	SPATA17-201	1255	357aa	ENSDARP00000071067.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6VAM9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153795.2	SPATA17-202	518	173aa	ENSDARP00000129659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,255 bps, Translation length: 357 residues

Version

ENSDART00000076596.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.