Transcript: ENSDART00000152057.2 HECTD1-205

Description

HECT domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030616-153]

Location

Chromosome 17: 28,686,432-28,688,850 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 12 domains and features, is associated with 98 variant alleles and maps to 13 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000054213.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000076344.6	HECTD1-201	9030	2576aa	ENSDARP00000070818.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8JFV5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000159067.2	HECTD1-210	8669	2576aa	ENSDARP00000139204.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8JFV5	-
ENSDART00000182851.1	HECTD1-208	8154	2570aa	ENSDARP00000145151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PW57	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164981.2	HECTD1-209	7971	2509aa	ENSDARP00000133558.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGL6	-
ENSDART00000152000.2	HECTD1-204	745	248aa	ENSDARP00000126492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000152057.2	HECTD1-205	566	189aa	ENSDARP00000126451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000129779.4	HECTD1-202	1761	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000125540.4	HECTD1-203	1221	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000140930.2	HECTD1-206	731	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000152109.2	HECTD1-207	587	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 566 bps, Translation length: 189 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000152057.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152057.2 HECTD1-205

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Transcript: ENSDART00000152057.2 HECTD1-205

Summary

About Us

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