Transcript: ENSDART00000180076.1 JAKMIP2-202

Description

janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]

Location

Chromosome 21: 43,036,527-43,065,657 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 26 domains and features, is associated with 654 variant alleles and maps to 95 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000053547.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000144151.2	JAKMIP2-201	2783	841aa	ENSDARP00000114621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000040169.9	JAKMIP2-203	4876	140aa	ENSDARP00000040168.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000187037.1	JAKMIP2-205	4775	164aa	ENSDARP00000150669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000180076.1	JAKMIP2-202	2409	802aa	ENSDARP00000155071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000190751.1	JAKMIP2-204	1803	600aa	ENSDARP00000151695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 2,409 bps, Translation length: 802 residues

Version

ENSDART00000180076.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000180076.1 JAKMIP2-202

Summary

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Transcript: ENSDART00000180076.1 JAKMIP2-202

Summary

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