Transcript: ENSDART00000136617.2 tdrkh-202

Description

tudor and KH domain containing [Source:ZFIN;Acc:ZDB-GENE-050327-81]

Location

Chromosome 12: 33,572,959-33,582,382 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 473 variant alleles and maps to 111 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000053474.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000009794.9	tdrkh-201	2382	573aa	ENSDARP00000005097.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0M9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142329.3	tdrkh-203	1845	445aa	ENSDARP00000118670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000184661.1	tdrkh-204	1753	573aa	ENSDARP00000144762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0M9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136617.2	tdrkh-202	790	211aa	ENSDARP00000113528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 790 bps, Translation length: 211 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000136617.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136617.2 tdrkh-202

Summary

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Transcript: ENSDART00000136617.2 tdrkh-202

Summary

About Us

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