Transcript: ENSDART00000075412.6 PLPP1-201

Description

phospholipid phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-080225-26]

Location

About this transcript

This transcript has 6 exons, is annotated with 31 domains and features, is associated with 1081 variant alleles and maps to 144 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000075412.6	PLPP1-201	1577	282aa	ENSDARP00000069895.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q772	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000163803.2	PLPP1-203	926	183aa	ENSDARP00000141098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000181828.1	PLPP1-205	861	286aa	ENSDARP00000154872.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000167380.2	PLPP1-204	846	281aa	ENSDARP00000135345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IK61	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162453.2	PLPP1-202	848	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,577 bps, Translation length: 282 residues

Version

ENSDART00000075412.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.