Transcript: ENSDART00000173943.2 c6ast4-204

Description

six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]

Location

About this transcript

This transcript has 8 exons, is associated with 6 variant alleles and maps to 77 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000144341.4	c6ast4-202	949	265aa	ENSDARP00000115337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000074463.6	c6ast4-201	795	265aa	ENSDARP00000068952.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000173943.2	c6ast4-204	805	60aa	ENSDARP00000142673.1	Nonsense mediated decay	-
ENSDART00000144397.2	c6ast4-203	832	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 8, Coding exons: 3, Transcript length: 805 bps, Translation length: 60 residues

Version

ENSDART00000173943.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]