Transcript: ENSDART00000086211.7 PCGF5-204

Description

polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]

Location

About this transcript

This transcript has 9 exons, is annotated with 16 domains and features, is associated with 501 variant alleles and maps to 186 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000086211.7	PCGF5-204	4109	232aa	ENSDARP00000080646.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1JPS1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152750.2	PCGF5-203	714	75aa	ENSDARP00000127000.1	Nonsense mediated decay	-	-
ENSDART00000152819.3	PCGF5-202	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000152271.2	PCGF5-201	453	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 4,109 bps, Translation length: 232 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1JPS1

Version

ENSDART00000086211.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.