Transcript: ENSDART00000155266.2 parietopsin-202

Description

parietopsin [Source:ZFIN;Acc:ZDB-GENE-101129-2]

Location

About this transcript

This transcript has 4 exons, is annotated with 41 domains and features, is associated with 17 variant alleles and maps to 132 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000073811.6	parietopsin-201	1148	336aa	ENSDARP00000068301.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYR6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155266.2	parietopsin-202	921	307aa	ENSDARP00000129839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 921 bps, Translation length: 307 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000155266.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.