Transcript: ENSDART00000073671.5 YTHDC1-203

Description

YTH N6-methyladenosine RNA binding protein C1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]

Location

About this transcript

This transcript has 16 exons, is annotated with 27 domains and features, is associated with 746 variant alleles and maps to 128 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000073671.5	YTHDC1-203	2578	679aa	ENSDARP00000068161.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145590.2	YTHDC1-201	674	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000140562.2	YTHDC1-202	660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,578 bps, Translation length: 679 residues

Version

ENSDART00000073671.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.