Transcript: ENSDART00000138097.2 POLA1-202

Description

polymerase (DNA directed), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-030114-9]

Location

About this transcript

This transcript has 36 exons, is associated with 1755 variant alleles and maps to 197 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128595.3	POLA1-203	5285	1468aa	ENSDARP00000106559.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FB68	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000127188.4	POLA1-201	5221	1456aa	ENSDARP00000105081.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000138097.2	POLA1-202	5066	738aa	ENSDARP00000117408.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 36, Coding exons: 20, Transcript length: 5,066 bps, Translation length: 738 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000138097.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.