Transcript: ENSDART00000149758.2 tlr5a-202

Description

toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]

Location

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 221 variant alleles and maps to 1 oligo probe.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148798.3	tlr5a-201	2851	881aa	ENSDARP00000124209.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4F1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149758.2	tlr5a-202	474	42aa	ENSDARP00000127318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 474 bps, Translation length: 42 residues

Version

ENSDART00000149758.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.