Transcript: ENSDART00000146727.2 PTBP3-201

Description

polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]

Location

About this transcript

This transcript has 14 exons, is annotated with 26 domains and features, is associated with 1259 variant alleles and maps to 178 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146727.2	PTBP3-201	1971	522aa	ENSDARP00000118637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FB37	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000040308.7	PTBP3-203	1620	522aa	ENSDARP00000040307.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FB37	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189946.1	PTBP3-202	1545	514aa	ENSDARP00000155618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 1,971 bps, Translation length: 522 residues

Version

ENSDART00000146727.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.