Transcript: ENSDART00000133927.3 sptlc1-202

Description

serine palmitoyltransferase, long chain base subunit 1 [Source:NCBI gene (formerly Entrezgene);Acc:553981]

Gene Synonyms

fc75h04, fp41c08, wu:fc75h04, wu:fp41c08, zgc:112247

Location

About this transcript

This transcript has 15 exons, is annotated with 15 domains and features, is associated with 1525 variant alleles and maps to 191 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133927.3	sptlc1-202	2109	484aa	ENSDARP00000123531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000063120.7	sptlc1-201	2083	472aa	ENSDARP00000063119.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q502G6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,109 bps, Translation length: 484 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000133927.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.