Transcript: ENSDART00000061914.7 MTHFD1L-205

Description

methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]

Location

Chromosome 20: 26,478,197-26,532,167 reverse strand.

About this transcript

This transcript has 28 exons, is annotated with 25 domains and features, is associated with 1331 variant alleles and maps to 272 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000042221.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000061914.7	MTHFD1L-205	5521	978aa	ENSDARP00000061913.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQ79	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183317.1	MTHFD1L-206	5750	978aa	ENSDARP00000154669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQ79	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131994.2	MTHFD1L-204	854	263aa	ENSDARP00000118299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147154.2	MTHFD1L-201	464	122aa	ENSDARP00000122040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000137628.2	MTHFD1L-202	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000138058.2	MTHFD1L-203	541	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 28, Coding exons: 27, Transcript length: 5,521 bps, Translation length: 978 residues

Version

ENSDART00000061914.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000061914.7 MTHFD1L-205

Summary

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Transcript: ENSDART00000061914.7 MTHFD1L-205

Summary

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