Transcript: ENSDART00000137287.3 pebp1-202

Description

phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]

Location

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 8 variant alleles and maps to 112 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137287.3	pebp1-202	1960	187aa	ENSDARP00000112865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NYS4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000061653.5	pebp1-201	1827	187aa	ENSDARP00000061652.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NYS4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140990.3	pebp1-203	886	125aa	ENSDARP00000119422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,960 bps, Translation length: 187 residues

Version

ENSDART00000137287.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.