Transcript: ENSDART00000134923.3 ap3s2-204

Description

adaptor related protein complex 3 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-040718-274]

Location

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 338 variant alleles and maps to 62 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000058339.7	ap3s2-201	1009	192aa	ENSDARP00000058338.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGS0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134923.3	ap3s2-204	858	168aa	ENSDARP00000117147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000131231.3	ap3s2-202	613	53aa	ENSDARP00000112771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133297.2	ap3s2-203	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 858 bps, Translation length: 168 residues

Version

ENSDART00000134923.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.