Transcript: ENSDART00000058256.6 zp3b-201

Description

zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]

Location

Chromosome 2: 6,253,246-6,258,796 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 20 domains and features, is associated with 233 variant alleles and maps to 180 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000039828.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000058256.6	zp3b-201	1781	532aa	ENSDARP00000058255.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000076700.6	zp3b-202	1557	518aa	ENSDARP00000071171.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000139429.2	zp3b-203	866	282aa	ENSDARP00000122970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000153328.2	zp3b-204	531	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,781 bps, Translation length: 532 residues

Version

ENSDART00000058256.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000058256.6 zp3b-201

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Transcript: ENSDART00000058256.6 zp3b-201

Summary

About Us

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