Transcript: ENSDART00000058007.5 samm50l-201

Description

sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]

Location

About this transcript

This transcript has 15 exons, is annotated with 6 domains and features, is associated with 490 variant alleles and maps to 171 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000058007.5	samm50l-201	2189	469aa	ENSDARP00000058006.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192357.1	samm50l-202	3671	461aa	ENSDARP00000155177.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,189 bps, Translation length: 469 residues

Version

ENSDART00000058007.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.