Transcript: ENSDART00000157217.2 slc36a4-201

Description

solute carrier family 36 member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]

Location

About this transcript

This transcript has 12 exons, is annotated with 40 domains and features, is associated with 1675 variant alleles and maps to 150 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000186215.1	slc36a4-202	5705	488aa	ENSDARP00000144819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F8C6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157217.2	slc36a4-201	2632	488aa	ENSDARP00000128190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F8C6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191628.1	slc36a4-203	1970	399aa	ENSDARP00000151342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,632 bps, Translation length: 488 residues

Version

ENSDART00000157217.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]