Transcript: ENSDART00000174171.2 si:cabz01090165.1-202

Description

si:cabz01090165.1 [Source:ZFIN;Acc:ZDB-GENE-161017-71]

Location

About this transcript

This transcript has 3 exons, is annotated with 1 domain and feature, is associated with 723 variant alleles and maps to 142 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000028944.9	si:cabz01090165.1-201	2054	639aa	ENSDARP00000038014.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FB24	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000174171.2	si:cabz01090165.1-202	3104	639aa	ENSDARP00000143052.1	Nonsense mediated decay	E7FB24	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 3,104 bps, Translation length: 639 residues

Version

ENSDART00000174171.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]