Transcript: ENSDART00000122754.4 nt5c2a-202

Description

5'-nucleotidase, cytosolic IIa [Source:ZFIN;Acc:ZDB-GENE-030131-3566]

Location

About this transcript

This transcript has 18 exons, is annotated with 12 domains and features, is associated with 351 variant alleles and maps to 188 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000057574.6	nt5c2a-201	3217	561aa	ENSDARP00000057573.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FC21	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000122754.4	nt5c2a-202	3187	551aa	ENSDARP00000105098.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000164508.3	nt5c2a-203	3102	561aa	ENSDARP00000131719.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FC21	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 3,187 bps, Translation length: 551 residues

Version

ENSDART00000122754.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.