Transcript: ENSDART00000057439.5 parla-201

Description

presenilin associated, rhomboid-like a [Source:ZFIN;Acc:ZDB-GENE-050327-8]

Location

About this transcript

This transcript has 10 exons, is annotated with 29 domains and features, is associated with 396 variant alleles and maps to 105 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000057439.5	parla-201	1613	383aa	ENSDARP00000057438.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137882.2	parla-202	889	59aa	ENSDARP00000112696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000153255.2	parla-204	810	100aa	ENSDARP00000127426.1	Nonsense mediated decay	-
ENSDART00000144640.2	parla-203	773	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,613 bps, Translation length: 383 residues

Version

ENSDART00000057439.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.