Transcript: ENSDART00000147355.2 RGS20-202

Description

regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]

Location

Chromosome 2: 30,762,096-30,784,333 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 370 variant alleles and maps to 186 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000038859.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000056735.5	RGS20-203	1352	225aa	ENSDARP00000056734.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DH47	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000182523.1	RGS20-204	5164	293aa	ENSDARP00000149943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q9K9	-
ENSDART00000131230.3	RGS20-201	836	221aa	ENSDARP00000119773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R0V5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000147355.2	RGS20-202	794	147aa	ENSDARP00000121806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 794 bps, Translation length: 147 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000147355.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000147355.2 RGS20-202

Summary

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Transcript: ENSDART00000147355.2 RGS20-202

Summary

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