Transcript: ENSDART00000007333.11 SLC25A36-201

Description

solute carrier family 25 member 36a [Source:ZFIN;Acc:ZDB-GENE-040718-415]

Location

About this transcript

This transcript has 7 exons, is annotated with 20 domains and features, is associated with 214 variant alleles and maps to 153 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000007333.11	SLC25A36-201	4657	311aa	ENSDARP00000004962.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GNU1 Q6DG32	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148135.3	SLC25A36-203	730	97aa	ENSDARP00000140604.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000138424.2	SLC25A36-202	803	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 4,657 bps, Translation length: 311 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6DG32

Version

ENSDART00000007333.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.