Transcript: ENSDART00000106626.5 THOC2-203

Description

THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]

Location

Chromosome 14: 12,391,906-12,486,622 forward strand.

About this transcript

This transcript has 39 exons, is annotated with 34 domains and features, is associated with 1432 variant alleles and maps to 546 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000037503.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000106626.5	THOC2-203	5492	1560aa	ENSDARP00000097404.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXF4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000054611.6	THOC2-206	5471	1504aa	ENSDARP00000054610.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000115408.5	THOC2-207	5457	1535aa	ENSDARP00000099604.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5B5	-
ENSDART00000126655.4	THOC2-205	1063	154aa	ENSDARP00000141871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000143316.3	THOC2-202	2584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000146178.2	THOC2-201	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000141138.2	THOC2-204	352	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 39, Coding exons: 38, Transcript length: 5,492 bps, Translation length: 1,560 residues

Version

ENSDART00000106626.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000106626.5 THOC2-203

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Transcript: ENSDART00000106626.5 THOC2-203

Summary

About Us

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