Transcript: ENSDART00000054426.5 lim2.3-201

Description

lens intrinsic membrane protein 2.3 [Source:ZFIN;Acc:ZDB-GENE-040718-327]

Location

Chromosome 15: 19,652,810-19,659,578 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 24 domains and features, is associated with 71 variant alleles and maps to 150 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000037402.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000054426.5	lim2.3-201	772	172aa	ENSDARP00000054425.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGY5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179822.1	lim2.3-204	2501	172aa	ENSDARP00000149267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGY5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134321.3	lim2.3-202	722	144aa	ENSDARP00000120101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000138680.2	lim2.3-203	426	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 772 bps, Translation length: 172 residues

Version

ENSDART00000054426.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000054426.5 lim2.3-201

Summary

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Transcript: ENSDART00000054426.5 lim2.3-201

Summary

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