Transcript: ENSDART00000054395.6 PAX5-202

Description

paired box 5 [Source:ZFIN;Acc:ZDB-GENE-001030-2]

Location

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features, is associated with 1459 variant alleles and maps to 85 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132602.3	PAX5-201	1675	396aa	ENSDARP00000114412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000054395.6	PAX5-202	1188	395aa	ENSDARP00000054394.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,188 bps, Translation length: 395 residues

Version

ENSDART00000054395.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.