Transcript: ENSDART00000139076.3 HBS1L-202

Description

HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]

Location

About this transcript

This transcript has 18 exons, is annotated with 34 domains and features, is associated with 627 variant alleles and maps to 216 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000139076.3	HBS1L-202	2424	682aa	ENSDARP00000118572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5Z6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180850.1	HBS1L-205	7535	675aa	ENSDARP00000154221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000189749.1	HBS1L-204	7444	662aa	ENSDARP00000149206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000134319.2	HBS1L-203	1204	362aa	ENSDARP00000118896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137278.2	HBS1L-201	643	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,424 bps, Translation length: 682 residues

Version

ENSDART00000139076.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.