Transcript: ENSDART00000148490.2 trpm7-201

Description

transient receptor potential cation channel, subfamily M, member 7 [Source:NCBI gene (formerly Entrezgene);Acc:280653]

Location

Chromosome 18: 113,928-127,873 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 19 domains and features, is associated with 294 variant alleles and maps to 323 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000036232.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000188914.1	trpm7-204	5364	1787aa	ENSDARP00000145809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000191052.1	trpm7-205	5319	1772aa	ENSDARP00000146646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000148490.2	trpm7-201	2499	606aa	ENSDARP00000124806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000149556.1	trpm7-203	625	209aa	ENSDARP00000123915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000149083.1	trpm7-202	514	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,499 bps, Translation length: 606 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000148490.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000148490.2 trpm7-201

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Transcript: ENSDART00000148490.2 trpm7-201

Summary

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