Transcript: ENSDART00000135484.3 YARS1-206

Description

tyrosyl-tRNA synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030425-2]

Location

Chromosome 19: 30,884,988-30,891,369 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 16 domains and features, is associated with 260 variant alleles and maps to 130 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000035913.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000052126.4	YARS1-201	2445	529aa	ENSDARP00000052125.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9C1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183224.1	YARS1-208	2463	529aa	ENSDARP00000144984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9C1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135484.3	YARS1-206	898	286aa	ENSDARP00000118032.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140603.3	YARS1-204	838	251aa	ENSDARP00000112715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143394.2	YARS1-207	753	228aa	ENSDARP00000120610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139599.3	YARS1-205	309	87aa	ENSDARP00000113450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145423.3	YARS1-203	758	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000137884.2	YARS1-202	608	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 898 bps, Translation length: 286 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000135484.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000135484.3 YARS1-206

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Transcript: ENSDART00000135484.3 YARS1-206

Summary

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