Transcript: ENSDART00000123562.5 OPHN1-202

Description

oligophrenin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-464]

Location

About this transcript

This transcript has 24 exons, is annotated with 31 domains and features, is associated with 1402 variant alleles and maps to 178 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000123562.5	OPHN1-202	3072	800aa	ENSDARP00000108325.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000046157.7	OPHN1-203	1577	266aa	ENSDARP00000046156.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DH84	-
ENSDART00000144654.2	OPHN1-201	710	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 3,072 bps, Translation length: 800 residues

Version

ENSDART00000123562.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.