Transcript: ENSDART00000035188.8 kcnip1b-201

Description

Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]

Location

About this transcript

This transcript has 8 exons, is annotated with 22 domains and features, is associated with 802 variant alleles and maps to 160 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000035188.8	kcnip1b-201	1984	215aa	ENSDARP00000031510.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V9G0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000109420.4	kcnip1b-202	1900	215aa	ENSDARP00000097839.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQI5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,984 bps, Translation length: 215 residues

Version

ENSDART00000035188.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.