Transcript: ENSDART00000173273.2 ZDHHC2-202

Description

zinc finger DHHC-type palmitoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050320-58]

Location

About this transcript

This transcript has 5 exons, is associated with 1068 variant alleles and maps to 23 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000011480.8	ZDHHC2-201	2610	361aa	ENSDARP00000019867.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BLG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173273.2	ZDHHC2-202	514	46aa	ENSDARP00000142183.1	Nonsense mediated decay	-	-
ENSDART00000173012.2	ZDHHC2-203	775	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 514 bps, Translation length: 46 residues

Version

ENSDART00000173273.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.