Transcript: ENSDART00000132214.2 mdm2-203

Description

MDM2 proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-990415-153]

Location

Chromosome 4: 23,127,307-23,129,633 forward strand.

About this transcript

This transcript has 4 exons, is associated with 238 variant alleles and maps to 54 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000033443.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077854.6	mdm2-201	1965	475aa	ENSDARP00000072320.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162859.2	mdm2-208	3486	486aa	ENSDARP00000138060.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2BC69	-
ENSDART00000122675.3	mdm2-202	2812	475aa	ENSDARP00000108555.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185788.1	mdm2-209	911	95aa	ENSDARP00000147328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000139543.3	mdm2-206	584	159aa	ENSDARP00000116463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132880.3	mdm2-204	642	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000138359.2	mdm2-205	607	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000132214.2	mdm2-203	294	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000143747.2	mdm2-207	400	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 294 bps,

Version

ENSDART00000132214.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000132214.2 mdm2-203

Summary

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Transcript: ENSDART00000132214.2 mdm2-203

Summary

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