Transcript: ENSDART00000143888.3 NEB-208

Description

nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]

Location

Chromosome 9: 22,805,138-22,892,838 reverse strand.

About this transcript

This transcript has 135 exons, is annotated with 366 domains and features, is associated with 2233 variant alleles and maps to 549 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000032630.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000143888.3	NEB-208	19401	6177aa	ENSDARP00000117320.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142585.3	NEB-206	2133	564aa	ENSDARP00000115733.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000101711.4	NEB-209	1431	290aa	ENSDARP00000092486.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000146486.3	NEB-202	1163	387aa	ENSDARP00000123050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000142020.2	NEB-203	523	175aa	ENSDARP00000121248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000140686.3	NEB-204	639	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000137045.2	NEB-207	459	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000137778.2	NEB-201	826	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000134090.3	NEB-205	763	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 135, Coding exons: 133, Transcript length: 19,401 bps, Translation length: 6,177 residues

Version

ENSDART00000143888.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000143888.3 NEB-208

Summary

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Transcript: ENSDART00000143888.3 NEB-208

Summary

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